Welcome to RadioViz

RadioViz is a software project for displaying and manipulating autoradiography grayscale images.

Features

• Display and analyze TIFF and XYZ images.

• Apply various colormaps and interpolation methods.

• Extract intensity profiles along lines in images.

• Build frequency histograms of regions of interest (ROIs).

• Rotate and align images to horizontal/vertical reference lines.

• Perform automatic cropping of full plate images into sample images.

Getting Started

To get started with RadioViz, please see the Installation Guide section.

Contents:

• Installation Guide
  • Standard binary installation
  • Source code installation via git
• Testing
  • Running Tests
• Usage
  • Start the program
  • Open autoradiography images
  • Playing with levels and other visualization parameters
  • Workspaces
  • Analysing intensity profiles
  • Analysing areas
  • Measuring distances and angles
  • Flipping images (horizontal or vertical)
  • Aligning images to a reference line
  • Autocropping regions
  • Manual cropping
• Extending RadioViz
  • Built-in vs external tools
  • Tool contract
  • Tool API and interaction
  • Creating new windows
  • Example from existing tools
  • Implementation checklist
  • Quickstart: a minimal tool
  • Plugin author typing guide
• API
  • radioviz

Indices and tables

• Index

• Module Index

• Search Page